KMID : 0613820120220111545
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Journal of Life Science 2012 Volume.22 No. 11 p.1545 ~ p.1551
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Cloning, Expression, and Characterization of a Novel GH-16 ¥â-Agarase from Agarivorans sp. JA-1
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Jeon Myong-Je
Kim A-Ram Lee Dong-Geun Lee Sang-Hyeon
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Abstract
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Authors report the glycoside hydrolase (GH) family 16 ¥â-agarase from the strain of Agarivorans sp. JA-1, which authors previously stated as recombinant expression and characterization of GH-50 and GH-118 ¥â-agarase. It comprised an open reading frame of 1,362 base pairs, which encodes a protein of 49,830 daltons consisting of 453 amino acid residues. Valuation of the total sequence showed that the enzyme has 98% nucleotide and 99% amino acid sequence similarities to those of GH-16 ¥â-agarase from Pseudoalteromonas sp. CY24. The gene corresponding to a mature protein of 429 amino acids was recombinantly expressed in Escherichia coli, and the enzyme was purified to homogeneity by affinity chromatography. It showed maximal activity at 40¡É and pH 5.0, representing 67.6 units/mg. Thin layer chromatography revealed that mainly neoagarohexaose and neoagarotetraose were produced from agarose. The enzyme would be valuable for the industrial production of functional neoagarooligosaccharides.
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KEYWORD
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¥â-agarase, glycoside hydrolase family 16, Agarivorans, cloning, expression
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